The aim of this blog is to encourage development and dissemination of knowledge of native protein structures at the quaternary level, that is, knowledge of the arrangements of subunits in functional proteins. The fundamental starting point of this discussion is that the arrangements seen in protein crystals are not necessarily the native arrangements.
Tuesday, November 20, 2012
Improved site for Structure Gallery
The Gallery of 3D Structures has now been made a free-standing site with all its software on the Nativeproteins server. This has fixed some failings in the control buttons and check-boxes of the Jmol interface. This new version of Jmol has been chosen so that it is prevented from writing to your computer - it will not be seen by your browser as a potential threat, but, on the other hand, it cannot write a jpg file to save an image. For those who prefer to use their own structure viewer, the files of atomic coordinates are also provided for download.
I have established some conventions for constructing and naming the files of reassembled atomic coordinates. These will be detailed in a future post.
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